Ocean Genome Legacy Collection

Hannah Appiah-Madson, Northeastern University Marine Science Center;Daniel Distel, Northeastern University Marine Science Center

Dataset credit

OBIS and OBIS USA

Contacts

RoleNameOrganization 
Primary contact Hannah Appiah-Madson Northeastern University Marine Science Center
Primary contact Daniel Distel Northeastern University Marine Science Center
Secondary contact Abigail Benson U.S. Geological Survey

Citation

Accession ID OGL-#####. The Ocean Genome Legacy Center. Northeastern University. Published on the web at www.northeastern.edu/ogl/catalog.
Appiah-madson, H and D. Distel. 2020. Ocean Genome Legacy Collection. Data downloaded from OBIS-SEAMAP (http://seamap.env.duke.edu/dataset/103152512) on yyyy-mm-dd and originated from OBIS (https://obis.org/dataset/9d629feb-ba03-4a83-908c-794d94d30531)

Abstract

The Ocean Genome Legacy Center (OGL) is a nonprofit marine research facility and genome bank dedicated to exploring and preserving the threatened biological diversity of the sea and oversees a collection of annotated and validated samples of genomic DNA and DNA-containing tissues representing a broad cross section of diversity of life in the oceans.

Purpose

N/A

Supplemental information

This dataset was downloaded from OBIS (https://obis.org/). The records for only marine mammals, seabirds, sea turtles and rays and sharks were extracted. Records with no longitude/latitude or no date (eventDate) were excluded.
OBIS dataset page:
https://obis.org/dataset/9d629feb-ba03-4a83-908c-794d94d30531
Data Provider's dataset page:
https://www1.usgs.gov/obis-usa/ipt/resource?r=ogl_msc_northeasternuniversity

References

Accession ID OGL-#####. The Ocean Genome Legacy Center. Northeastern University. Published on the web at www.northeastern.edu/ogl/catalog.

Attributes

Overview

This section explains attributes included in the original dataset. OBIS-SEAMAP restricts the attributes available to the public to date/time, lat/lon and species names/counts only. Should you need other attributes described here, you are encouraged to contact the data provider.

Attributes described below represent those in the original dataset provided by the provider.
All attributes are included in the downloadable file (CSV or ESRI File Geodatabase) for "Complete Set of Dataset".

Attributes in dataset

Attribute (table column)Description
oidInternal ID
idRecord ID
dataset_idDataset ID
scientificnameScientific name
vernacularnameVernacular name
aphiaidAphia ID
taxonranktaxononic rank
individualcountGroup size / individual count
eventdateEvent date (precision varies)
eventtimeEvent time
decimallatitudeLatitude in decimal degrees
decimallongitudeLongitude in decimal degrees
coordinateprecisionCoordinate precision
catalognumberCatalog number
collectioncodeCollection code
occurrencestatusOccurrence status
basisofrecordBasis of record (HumanObservation / MachineObservation)
modifiedDate/time the record was modified
node_idNode ID
occurrenceidOccurrence ID
occurrenceremarksOccurrence remarks
eventidEvent ID
institutioncodeInstitution code
lifestageLife stage
sexGender of the animal if known
speciesSpecies by provider
datasetidDataset ID by provider
countryCountry
localityLocation of ocean
waterbodyDetails of ocean
droppedFlag indicating the record was dropped (always false)
absenceFlag indicating the record represents the absence of the species (always false)
marineFlag indicating the record is for marine life (always true)
OBIS-SEAMAP ID103152512
Seabirds0
Marine mammals4
Sea turtles0
Rays and sharks3
Other species0
Non spatial0
Non species0
Total7
Date, Begin2011-01-01
Date, End2016-08-17
Temporal prec.111000
Latitude21.46 - 43.76
Longitude-82.54 - -70.13
Coord. prec.6 decimal digits
PlatformVarious
Data typeAnimal sighting
EffortN/A
Traveled (km)0
0
Contr. throughiOBIS
Registered2020-06-30
Updated2021-02-05
StatusPublished
Sharing policy CC-BY (All)
Also available in None
See metadata in static HTML
See metadata in FGDC XML
See download history / statistics